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Shaahin Angizi, Naima Ahmed Fahmi, Deniz Najafi, Wei Zhang and Deliang Fan
In this work, we present an efficient Processing in MRAM-Accelerated De Bruijn Graph-based DNA Assembly platform, named PANDA, based on an optimized and hardware-friendly genome assembly algorithm. PANDA is able to assemble large-scale DNA sequence datas...
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Zach D. Merino, Jenny Farmer and Donald J. Jacobs
We present a novel nonparametric adaptive partitioning and stitching (NAPS) algorithm to estimate a probability density function (PDF) of a single variable. Sampled data is partitioned into blocks using a branching tree algorithm that minimizes deviation...
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Alaa Albtoush, Farizah Yunus, Khaled Almi?ani and Noor Maizura Mohamad Noor
Scientific workflows consist of numerous tasks subject to constraints on data dependency. Effective workflow scheduling is perpetually necessary to efficiently utilize the provided resources to minimize workflow execution cost and time (makespan). Accord...
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Yang Wang, Jie Liu, Xiaoxiong Zhu, Qingyang Zhang, Shengguo Li and Qinglin Wang
Structured grid-based sparse matrix-vector multiplication and Gauss?Seidel iterations are very important kernel functions in scientific and engineering computations, both of which are memory intensive and bandwidth-limited. GPDSP is a general purpose dig...
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Evgeny Yakovlev, Alina Kudryavtseva and Aleksandr Orlov
Dating young peatlands using the 210Pb dating procedure is a challenging task. The traditional 210Pb age models assume an exponential decline in radioactivity in line with depth in the peat profile. Lead exhibits considerable migratory capacity in Arctic...
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